Streptomyces coryli sp. nov., isolated from hazelnut orchard soil

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dc.authoridTatar, Demet / 0000-0002-9317-3263
dc.authoridSaygın, Hayrettin / 0000-0002-8642-5872
dc.authoridVeyisoğlu, Aysel / 0000-0002-1406-5513
dc.authoridŞahin, Nevzat / 0000-0002-6026-656X
dc.authorwosidTatar, Demet / AAY-4486-2021
dc.authorwosidTatar, Demet / AAY-4347-2021
dc.authorwosidVeyisoğlu, Aysel / AAY-9698-2021
dc.contributor.authorSaygın, Hayrettin
dc.contributor.authorVeyisoğlu, Aysel
dc.contributor.authorTatar, Demet
dc.contributor.authorNigiz, Cengiz
dc.contributor.authorTokatlı, Ali
dc.contributor.authorŞahin, Nevzat
dc.date.accessioned2021-11-01T15:05:05Z
dc.date.available2021-11-01T15:05:05Z
dc.date.issued2020
dc.departmentHitit Üniversitesi, Sağlık Hizmetleri Meslek Yüksekokulu, Tıbbi Hizmetler ve Teknikler Bölümü
dc.description.abstractA novel actinobacteria, isolate A7024(T), was isolated from commercial hazelnut orchard soil sample which was collected at Duzce, West Black Sea region, Turkey. A polyphasic taxonomic study was carried out to determine the status of this isolate. The phylogenetic tree reconstructed using the neighbour-joining algorithm based on 165 rRNA gene sequences indicated that isolate A7024(T) was positioned within the members of the genus Streptomyces with the highest sequence similarity (97.7%) to Streptomyces cadmiisoli ZFG47(T). The organism formed an extensively branched substrate and aerial hyphae which generated irregular rod-shaped spores with smooth-surfaces. The cell wall of strain A7024(T) contained LL-diaminopimelic. Glucose, mannose and ribose were detected as whole-cell sugars. Its polar lipids were diphosphatidylglycerol. phosphatidylethanol-amine, phosphatidylinositol, three unidentified phospholipids and three unidentified glycolipids. Major menaquinones were MK-9(H-6) and MK-9(H-4). The major cellular fatty acids were iso-C-16:0, anteiso-C-1(5:0) and anteiso-C-1(7:)0. Strain A7024(T) had a genome size of 9.0 Mb with a genome G+C content of 71.5 mol%. The low level of 16S rRNA gene similarity, 19.3 +/- 2.3% digital DNA-DNA-hybridization and 76.94% average nucleotide identity values, as well as some different phenotypic characteristics allowed the strain to be distinguished from the closely related type strains. Therefore, it is concluded that strain A7024(T) represents a novel species of the genus of Streptomyces, for which the name Streptomyces coryli sp. nov. is proposed. The type strain is A7024(T) (=DSM 42066(T)=KCTC 29102(T)=NRRL B-24888(T)).
dc.identifier.citationSaygin, H., Veyisoglu, A., Tatar, D., Nigiz, C., Tokatli, A., & Sahin, N. (2020). Streptomyces coryli sp. nov., isolated from hazelnut orchard soil. International Journal of Systematic and Evolutionary Microbiology, 70(8), 4791-4797.
dc.identifier.doi10.1099/ijsem.0.004347
dc.identifier.endpage4797en_US
dc.identifier.issn1466-5026
dc.identifier.issn1466-5034
dc.identifier.issue8en_US
dc.identifier.pmid32701424
dc.identifier.scopus2-s2.0-85090078637
dc.identifier.scopusqualityQ1
dc.identifier.startpage4791en_US
dc.identifier.urihttps://doi.org/10.1099/ijsem.0.004347
dc.identifier.urihttps://hdl.handle.net/11491/7101
dc.identifier.volume70en_US
dc.identifier.wosWOS:000583797700043
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.institutionauthorTatar, Demet
dc.language.isoen
dc.publisherMicrobiology Soc
dc.relation.ispartofInternational Journal Of Systematic And Evolutionary Microbiology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectStreptomyces coryli sp. nov.en_US
dc.subjectphylogenyen_US
dc.subjectPolyphasic taxonomyen_US
dc.subject16S rRNA geneen_US
dc.titleStreptomyces coryli sp. nov., isolated from hazelnut orchard soil
dc.typeArticle

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